STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_02809PKS_ER domain-containing protein. (356 aa)    
Predicted Functional Partners:
B0A49_13992
Fumarate hydratase, mitochondrial.
   
  0.648
B0A49_12508
Fumarate hydratase, mitochondrial.
   
  0.648
B0A49_11082
Uncharacterized protein.
   
  0.648
B0A49_01203
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
   
 
  0.608
B0A49_10697
CoA_binding domain-containing protein.
   
 
  0.600
B0A49_05647
CoA_binding domain-containing protein.
   
 
  0.600
B0A49_03111
Aspartate aminotransferase.
    
  0.499
B0A49_05550
Aspartate aminotransferase.
    
  0.499
B0A49_13051
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 0.496
B0A49_01498
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 0.496
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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