STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_04547RRM domain-containing protein. (340 aa)    
Predicted Functional Partners:
B0A49_00923
Uncharacterized protein.
   
   0.841
B0A49_04647
Uncharacterized protein.
   
   0.685
B0A49_02923
Uncharacterized protein.
   
   0.685
B0A49_01720
Uncharacterized protein; Belongs to the OSBP family.
   
   0.576
B0A49_00155
Uncharacterized protein.
   
    0.574
B0A49_09536
Uncharacterized protein.
   
   0.508
B0A49_04500
Uncharacterized protein.
   
   0.508
B0A49_07189
Thioredoxin domain-containing protein.
   
    0.505
B0A49_06519
Thioredoxin domain-containing protein.
   
    0.505
B0A49_03282
Uncharacterized protein.
   
   0.498
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.