STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_03940rRNA 2'-O-methyltransferase fibrillarin. (324 aa)    
Predicted Functional Partners:
B0A49_02885
40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.999
B0A49_07573
Nucleolar protein 56.
   
 0.999
B0A49_01274
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
B0A49_01930
Uncharacterized protein.
   
 0.999
B0A49_01755
Nop domain-containing protein.
   
 0.999
B0A49_09575
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.998
B0A49_00218
Centromere/microtubule-binding protein cbf5.
   
 
 0.998
B0A49_01307
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
  0.997
B0A49_00828
BP28CT domain-containing protein.
   
 0.997
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.997
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.