STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_06917Helicase ATP-binding domain-containing protein. (862 aa)    
Predicted Functional Partners:
B0A49_09124
Uncharacterized protein.
    
 0.980
B0A49_07917
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.979
B0A49_03727
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.977
B0A49_11424
TFIIB-type domain-containing protein.
    
 0.962
B0A49_08672
Uncharacterized protein.
    
 0.948
B0A49_07129
RPOL4c domain-containing protein.
    
 0.947
B0A49_01708
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.945
B0A49_00113
Uncharacterized protein.
    
 0.945
B0A49_01165
RNA_pol_L_2 domain-containing protein.
    
  0.942
B0A49_09143
ERCC3_RAD25_C domain-containing protein.
   
 0.941
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.