STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_02604Uncharacterized protein. (108 aa)    
Predicted Functional Partners:
B0A49_00353
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.944
B0A49_08717
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
   0.936
B0A49_08271
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.935
B0A49_05255
40S ribosomal protein S20.
   
   0.929
B0A49_08053
60S ribosomal protein L25.
   
   0.925
B0A49_02116
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.923
B0A49_03939
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
   0.921
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
   0.921
B0A49_01210
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.920
B0A49_03041
60S ribosomal protein L21-A.
   
 
 0.920
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.