STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_05650NUP50 domain-containing protein. (863 aa)    
Predicted Functional Partners:
B0A49_02806
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.984
B0A49_09060
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.943
B0A49_01762
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.943
B0A49_10463
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.933
B0A49_00330
Uncharacterized protein.
   
 
 0.924
B0A49_01218
Glyco_trans_2-like domain-containing protein.
   
 
 0.918
B0A49_01424
Nsp1_C domain-containing protein.
   
 
 0.916
B0A49_12308
Nucleoporin_C domain-containing protein.
   
 0.877
B0A49_10201
Uncharacterized protein.
   
 0.877
B0A49_07650
Nucleoporin_C domain-containing protein.
   
 0.877
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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