B0A49_01727 protein (Cryomyces minteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B0A49_01727

Uncharacterized protein. (329 aa)

Predicted Functional Partners:

B0A49_10948

0.825

B0A49_06136

0.825

B0A49_05490

0.800

B0A49_05616

0.800

B0A49_07805

0.755

B0A49_07622

0.755

B0A49_11198

0.751

B0A49_01730

0.751

B0A49_11407

0.746

B0A49_07523

0.746

Your Current Organism:

Cryomyces minteri

NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A49_01727	B0A49_01730	A0A4U0XIH3	A0A4U0XPX5	Uncharacterized protein.	Uncharacterized protein.	0.751
B0A49_01727	B0A49_05490	A0A4U0XIH3	A0A4U0X4S1	Uncharacterized protein.	Inositol-1-monophosphatase.	0.800
B0A49_01727	B0A49_05616	A0A4U0XIH3	A0A4U0XCM7	Uncharacterized protein.	Inositol-1-monophosphatase.	0.800
B0A49_01727	B0A49_06136	A0A4U0XIH3	A0A4U0X7C9	Uncharacterized protein.	Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily.	0.825
B0A49_01727	B0A49_07523	A0A4U0XIH3	A0A4U0WZQ0	Uncharacterized protein.	Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.	0.746
B0A49_01727	B0A49_07622	A0A4U0XIH3	A0A4V5NEJ3	Uncharacterized protein.	Putative hexaprenyl pyrophosphate synthase, mitochondrial.	0.755
B0A49_01727	B0A49_07805	A0A4U0XIH3	A0A4U0WR54	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.755
B0A49_01727	B0A49_10948	A0A4U0XIH3	A0A4U0WM67	Uncharacterized protein.	Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily.	0.825
B0A49_01727	B0A49_11198	A0A4U0XIH3	A0A4U0W6G2	Uncharacterized protein.	Uncharacterized protein.	0.751
B0A49_01727	B0A49_11407	A0A4U0XIH3	A0A4U0VND5	Uncharacterized protein.	Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.	0.746
B0A49_01730	B0A49_01727	A0A4U0XPX5	A0A4U0XIH3	Uncharacterized protein.	Uncharacterized protein.	0.751
B0A49_01730	B0A49_05490	A0A4U0XPX5	A0A4U0X4S1	Uncharacterized protein.	Inositol-1-monophosphatase.	0.787
B0A49_01730	B0A49_05616	A0A4U0XPX5	A0A4U0XCM7	Uncharacterized protein.	Inositol-1-monophosphatase.	0.787
B0A49_05490	B0A49_01727	A0A4U0X4S1	A0A4U0XIH3	Inositol-1-monophosphatase.	Uncharacterized protein.	0.800
B0A49_05490	B0A49_01730	A0A4U0X4S1	A0A4U0XPX5	Inositol-1-monophosphatase.	Uncharacterized protein.	0.787
B0A49_05490	B0A49_05616	A0A4U0X4S1	A0A4U0XCM7	Inositol-1-monophosphatase.	Inositol-1-monophosphatase.	0.788
B0A49_05490	B0A49_11198	A0A4U0X4S1	A0A4U0W6G2	Inositol-1-monophosphatase.	Uncharacterized protein.	0.787
B0A49_05616	B0A49_01727	A0A4U0XCM7	A0A4U0XIH3	Inositol-1-monophosphatase.	Uncharacterized protein.	0.800
B0A49_05616	B0A49_01730	A0A4U0XCM7	A0A4U0XPX5	Inositol-1-monophosphatase.	Uncharacterized protein.	0.787
B0A49_05616	B0A49_05490	A0A4U0XCM7	A0A4U0X4S1	Inositol-1-monophosphatase.	Inositol-1-monophosphatase.	0.788