STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_05583L-arabinitol 4-dehydrogenase. (114 aa)    
Predicted Functional Partners:
B0A49_12927
L-arabinitol 4-dehydrogenase.
 
     0.939
B0A49_02232
Phosphotransferase.
   
 
 0.757
B0A49_08599
Putative NADP-dependent mannitol dehydrogenase.
   
 
  0.755
B0A49_07945
L-xylulose reductase.
   
 
  0.755
B0A49_11309
Uncharacterized protein.
   
 
  0.748
B0A49_05145
Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.
     
 0.742
B0A49_03875
Putative D-xylulose kinase A.
  
 
 0.707
B0A49_10975
Putative NAD(P)H-dependent D-xylose reductase xyl1.
  
 0.668
B0A49_04469
Putative NAD(P)H-dependent D-xylose reductase xyl1.
  
 0.668
B0A49_07198
Phosphotransferase; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. Belongs to the hexokinase family.
   
 
 0.635
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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