STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_0219960S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (215 aa)    
Predicted Functional Partners:
B0A49_01321
60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.999
B0A49_09422
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.999
B0A49_08053
60S ribosomal protein L25.
   
 0.999
B0A49_09174
60S ribosomal protein L7.
   
 0.999
B0A49_02885
40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.
   
 0.999
B0A49_07590
Uncharacterized protein.
   
 0.999
B0A49_02253
60S ribosomal protein L22.
   
 0.999
B0A49_06066
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.999
B0A49_06836
60S ribosomal protein L34-B.
   
 0.999
B0A49_07024
Uncharacterized protein.
   
 0.999
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.