B0A49_00619 protein (Cryomyces minteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B0A49_00619

Uncharacterized protein. (111 aa)

Predicted Functional Partners:

B0A49_07412

0.925

B0A49_01573

0.925

B0A49_11410

0.904

B0A49_00472

0.864

B0A49_13210

0.831

B0A49_07969

0.831

B0A49_07789

0.831

B0A49_06818

0.831

B0A49_13483

0.831

B0A49_09630

0.812

Your Current Organism:

Cryomyces minteri

NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A49_00472	B0A49_00619	A0A4U0XYF9	A0A4U0XV27	Heat shock protein hsp88.	Uncharacterized protein.	0.864
B0A49_00472	B0A49_01573	A0A4U0XYF9	A0A4U0XXJ1	Heat shock protein hsp88.	UBA domain-containing protein.	0.942
B0A49_00472	B0A49_06818	A0A4U0XYF9	A0A4U0WZM5	Heat shock protein hsp88.	Heat shock protein 90.	0.929
B0A49_00472	B0A49_07412	A0A4U0XYF9	A0A4U0X1P1	Heat shock protein hsp88.	Uncharacterized protein.	0.942
B0A49_00472	B0A49_07789	A0A4U0XYF9	A0A4U0WSI8	Heat shock protein hsp88.	Uncharacterized protein.	0.924
B0A49_00472	B0A49_07969	A0A4U0XYF9	A0A4U0WPM3	Heat shock protein hsp88.	Uncharacterized protein.	0.924
B0A49_00472	B0A49_09630	A0A4U0XYF9	A0A4U0W3T6	Heat shock protein hsp88.	J domain-containing protein.	0.902
B0A49_00472	B0A49_11410	A0A4U0XYF9	A0A4V6WKG0	Heat shock protein hsp88.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.933
B0A49_00472	B0A49_13210	A0A4U0XYF9	A0A4U0VSB7	Heat shock protein hsp88.	Heat shock protein 90.	0.929
B0A49_00472	B0A49_13483	A0A4U0XYF9	A0A4V5N9J3	Heat shock protein hsp88.	Uncharacterized protein.	0.924
B0A49_00619	B0A49_00472	A0A4U0XV27	A0A4U0XYF9	Uncharacterized protein.	Heat shock protein hsp88.	0.864
B0A49_00619	B0A49_01573	A0A4U0XV27	A0A4U0XXJ1	Uncharacterized protein.	UBA domain-containing protein.	0.925
B0A49_00619	B0A49_06818	A0A4U0XV27	A0A4U0WZM5	Uncharacterized protein.	Heat shock protein 90.	0.831
B0A49_00619	B0A49_07412	A0A4U0XV27	A0A4U0X1P1	Uncharacterized protein.	Uncharacterized protein.	0.925
B0A49_00619	B0A49_07789	A0A4U0XV27	A0A4U0WSI8	Uncharacterized protein.	Uncharacterized protein.	0.831
B0A49_00619	B0A49_07969	A0A4U0XV27	A0A4U0WPM3	Uncharacterized protein.	Uncharacterized protein.	0.831
B0A49_00619	B0A49_09630	A0A4U0XV27	A0A4U0W3T6	Uncharacterized protein.	J domain-containing protein.	0.812
B0A49_00619	B0A49_11410	A0A4U0XV27	A0A4V6WKG0	Uncharacterized protein.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.904
B0A49_00619	B0A49_13210	A0A4U0XV27	A0A4U0VSB7	Uncharacterized protein.	Heat shock protein 90.	0.831
B0A49_00619	B0A49_13483	A0A4U0XV27	A0A4V5N9J3	Uncharacterized protein.	Uncharacterized protein.	0.831