STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_07906Epimerase domain-containing protein. (353 aa)    
Predicted Functional Partners:
B0A49_10881
Uncharacterized protein.
   
 0.973
B0A49_00581
Uncharacterized protein.
   
 
 0.901
B0A49_03873
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.845
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.844
B0A49_09856
Delta(7)-sterol 5(6)-desaturase; Belongs to the sterol desaturase family.
   
 0.835
B0A49_03480
Delta(7)-sterol 5(6)-desaturase; Belongs to the sterol desaturase family.
   
 0.835
B0A49_00353
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.830
B0A49_03678
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
  0.829
B0A49_03661
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.826
B0A49_02116
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
  0.819
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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