B0A49_07856 protein (Cryomyces minteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B0A49_07856

Cytochrome c1, heme protein, mitochondrial. (327 aa)

Predicted Functional Partners:

B0A49_11548

0.998

B0A49_06658

0.998

B0A49_01403

0.998

B0A49_09101

0.997

B0A49_08056

0.997

B0A49_05452

0.995

B0A49_00647

0.995

B0A49_12078

0.994

B0A49_01419

0.994

B0A49_02085

0.994

Your Current Organism:

Cryomyces minteri

NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B0A49_00647	B0A49_01419	A0A4U0Y2G3	A0A4U0XSL6	Rieske domain-containing protein.	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	0.996
B0A49_00647	B0A49_02085	A0A4U0Y2G3	A0A4V5NHN2	Rieske domain-containing protein.	Uncharacterized protein.	0.995
B0A49_00647	B0A49_05452	A0A4U0Y2G3	A0A4U0X688	Rieske domain-containing protein.	NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial.	0.996
B0A49_00647	B0A49_06658	A0A4U0Y2G3	A0A4U0WLC3	Rieske domain-containing protein.	Uncharacterized protein.	0.999
B0A49_00647	B0A49_07856	A0A4U0Y2G3	A0A4V5NFA0	Rieske domain-containing protein.	Cytochrome c1, heme protein, mitochondrial.	0.995
B0A49_00647	B0A49_08056	A0A4U0Y2G3	A0A4V5NG92	Rieske domain-containing protein.	Uncharacterized protein.	0.998
B0A49_00647	B0A49_09101	A0A4U0Y2G3	A0A4U0X064	Rieske domain-containing protein.	NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial; Belongs to the complex I 30 kDa subunit family.	0.998
B0A49_00647	B0A49_11548	A0A4U0Y2G3	A0A4U0VN30	Rieske domain-containing protein.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.999
B0A49_00647	B0A49_12078	A0A4U0Y2G3	A0A4U0VK37	Rieske domain-containing protein.	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	0.996
B0A49_01403	B0A49_01419	A0A4U0XJ17	A0A4U0XSL6	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	0.999
B0A49_01403	B0A49_02085	A0A4U0XJ17	A0A4V5NHN2	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Uncharacterized protein.	0.998
B0A49_01403	B0A49_05452	A0A4U0XJ17	A0A4U0X688	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial.	0.999
B0A49_01403	B0A49_06658	A0A4U0XJ17	A0A4U0WLC3	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Uncharacterized protein.	0.999
B0A49_01403	B0A49_07856	A0A4U0XJ17	A0A4V5NFA0	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Cytochrome c1, heme protein, mitochondrial.	0.998
B0A49_01403	B0A49_08056	A0A4U0XJ17	A0A4V5NG92	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Uncharacterized protein.	0.998
B0A49_01403	B0A49_09101	A0A4U0XJ17	A0A4U0X064	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial; Belongs to the complex I 30 kDa subunit family.	0.999
B0A49_01403	B0A49_11548	A0A4U0XJ17	A0A4U0VN30	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.999
B0A49_01403	B0A49_12078	A0A4U0XJ17	A0A4U0VK37	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	0.999
B0A49_01419	B0A49_00647	A0A4U0XSL6	A0A4U0Y2G3	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	Rieske domain-containing protein.	0.996
B0A49_01419	B0A49_01403	A0A4U0XSL6	A0A4U0XJ17	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.999