STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_04756Epimerase domain-containing protein. (528 aa)    
Predicted Functional Partners:
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.922
B0A49_03661
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.921
B0A49_00353
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.921
B0A49_02116
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.919
B0A49_05255
40S ribosomal protein S20.
   
  0.918
B0A49_03678
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.918
B0A49_01878
TYR_PHOSPHATASE_2 domain-containing protein.
   
 0.914
B0A49_02885
40S ribosomal protein S16-B; Belongs to the universal ribosomal protein uS9 family.
   
 0.913
B0A49_03873
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.910
B0A49_06107
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
  0.902
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.