STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A49_05960Uncharacterized protein. (518 aa)    
Predicted Functional Partners:
B0A49_02916
Matrin-type domain-containing protein.
   
 0.996
B0A49_01905
Pre-mRNA-splicing factor rse1.
   
 0.996
B0A49_05978
Matrin-type domain-containing protein.
   
 0.995
B0A49_05602
Matrin-type domain-containing protein.
   
 0.995
B0A49_11275
PSP domain-containing protein.
   
 0.994
B0A49_10459
Uncharacterized protein.
   
 0.994
B0A49_01007
PHD finger-like domain-containing protein 5B.
   
 0.994
B0A49_02350
Pre-mRNA-processing ATP-dependent RNA helicase prp5.
   
 0.994
B0A49_00031
Uncharacterized protein.
   
 0.994
B0A49_02636
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.993
Your Current Organism:
Cryomyces minteri
NCBI taxonomy Id: 331657
Other names: C. minteri, CBS 116302, CBS 116302 (ex-type); CCFEE 5187, CCFEE 5187
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.