STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03018.1PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: cte:CT2236 muramoyltetrapeptide carboxypeptidase, putative. (316 aa)    
Predicted Functional Partners:
ACE04791.1
PFAM: beta-lactamase; KEGG: cte:CT0324 D-alanyl-D-alanine carboxypeptidease, putative.
 
     0.686
ACE03019.1
PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: plt:Plut_0020 ATP synthase F1, epsilon subunit.
       0.589
ACE05142.1
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: pvi:Cvib_0747 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
    
 0.579
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
       0.572
ACE03231.1
PFAM: conserved hypothetical protein; KEGG: cte:CT2057 hypothetical protein.
  
     0.564
ACE04052.1
PFAM: conserved hypothetical protein; KEGG: cte:CT0970 hypothetical protein.
  
     0.560
ACE03149.1
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cte:CT2124 beta-N-acetylglucosaminidase.
  
   
 0.464
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.