Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE03029.1PFAM: sodium:neurotransmitter symporter; KEGG: pvi:Cvib_1274 sodium:neurotransmitter symporter. (510 aa)    
Predicted Functional Partners:
ACE04543.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
 
  0.693
ACE03617.1
PFAM: phosphoribulokinase/uridine kinase; KEGG: plt:Plut_0330 uridine kinase-like.
   
 
  0.692
ACE03028.1
Hypothetical protein; KEGG: gbe:GbCGDNIH1_2299 ABC transporter permease protein.
       0.523
ACE04569.1
TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: pvi:Cvib_1366 SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
 
 0.488
ACE03030.1
PFAM: putative RNA methylase; DNA methylase N-4/N-6 domain protein; KEGG: cch:Cag_1099 DNA modification methylase-like; Belongs to the N(4)/N(6)-methyltransferase family.
       0.447
ACE03031.1
KEGG: sat:SYN_02435 hypothetical cytosolic protein.
       0.447
ACE04979.1
TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: vvy:VV2044 sodium/alanine symporter.
 
   
 0.411
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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