STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03029.1PFAM: sodium:neurotransmitter symporter; KEGG: pvi:Cvib_1274 sodium:neurotransmitter symporter. (510 aa)    
Predicted Functional Partners:
ACE03028.1
Hypothetical protein; KEGG: gbe:GbCGDNIH1_2299 ABC transporter permease protein.
       0.523
ACE04569.1
TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: pvi:Cvib_1366 SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.498
ACE04979.1
TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: vvy:VV2044 sodium/alanine symporter.
 
  
 0.453
ACE03030.1
PFAM: putative RNA methylase; DNA methylase N-4/N-6 domain protein; KEGG: cch:Cag_1099 DNA modification methylase-like; Belongs to the N(4)/N(6)-methyltransferase family.
       0.447
ACE03031.1
KEGG: sat:SYN_02435 hypothetical cytosolic protein.
       0.447
ACE04210.1
PFAM: sodium:dicarboxylate symporter; KEGG: noc:Noc_1770 sodium/dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
  
 0.421
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.