STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03036.1Hypothetical protein; KEGG: gfo:GFO_2191 TonB-dependent outer membrane receptor. (154 aa)    
Predicted Functional Partners:
ACE03035.1
PFAM: CHAP domain containing protein; KEGG: ssp:SSP0609 putative secretory antigen precursor.
       0.773
ACE03034.1
Hypothetical protein; KEGG: amr:AM1_6172 transposase, IS5 family, putative.
       0.615
ACE03037.1
Hypothetical protein.
       0.527
ACE03594.1
TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: plt:Plut_1585 TonB-like.
  
 
 0.525
ACE04630.1
KEGG: cte:CT0635 hypothetical protein.
  
 
 0.525
menF
Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate.
   
  
 0.505
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.