STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03056.1PFAM: Radical SAM domain protein; KEGG: cch:Cag_1591 hypothetical protein. (352 aa)    
Predicted Functional Partners:
ACE03893.1
KEGG: cte:CT1415 hypothetical protein.
 
     0.778
ACE03892.1
PFAM: glycosyl transferase family 2; KEGG: cte:CT1416 glycosyl transferase.
 
     0.771
ACE03711.1
Methyltransferase type 11; PFAM: putative methyltransferase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sfu:Sfum_0266 methyltransferase type 11.
     0.679
ACE05008.1
PFAM: Rhodanese domain protein; KEGG: ana:alr2407 hypothetical protein.
  
   
 0.649
ACE04054.1
PFAM: fatty acid hydroxylase; KEGG: rde:RD1_1450 sterol desaturase, putative.
 
     0.579
ACE03055.1
KEGG: pvi:Cvib_1453 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases.
       0.545
ACE03057.1
NADH dehydrogenase (quinone); PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); KEGG: pvi:Cvib_1257 putative monovalent cation/H+ antiporter subunit A.
       0.477
ACE03058.1
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: pvi:Cvib_1258 putative monovalent cation/H+ antiporter subunit B.
       0.477
ACE03059.1
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: pvi:Cvib_1259 putative monovalent cation/H+ antiporter subunit C.
       0.477
ACE03060.1
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: pvi:Cvib_1260 NADH dehydrogenase (quinone).
       0.466
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.