STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03068.1PFAM: NAD(P)H dehydrogenase (quinone); KEGG: gvi:glr1342 probable NADP(H) oxidoreductase. (197 aa)    
Predicted Functional Partners:
ACE03069.1
TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: gvi:glr1343 glutathione-regulated potassium efflux system protein KefC homolog; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
 
 0.993
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.859
ACE04048.1
PFAM: aminotransferase class I and II; KEGG: cch:Cag_1440 aspartate aminotransferase, putative.
   
    0.524
ACE04199.1
PFAM: aminotransferase class I and II; KEGG: plt:Plut_1106 aspartate aminotransferase.
   
    0.524
ACE04699.1
PFAM: aminotransferase class I and II; KEGG: aba:Acid345_1458 aminotransferase, class I and II.
   
    0.524
ACE03066.1
PFAM: protein of unknown function nitrogen fixation.
       0.518
ACE03067.1
Hypothetical protein.
       0.518
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.