Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE03070.1PFAM: cation transporter; KEGG: dps:DP0723 trk system potassium uptake protein (TrkH). (485 aa)    
Predicted Functional Partners:
ACE03071.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: dps:DP0724 potassium transporter peripheral membrane component.
 
 
 0.964
ACE04534.1
PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: csa:Csal_1095 sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.675
ACE03076.1
Hypothetical protein; KEGG: cte:CT0121 potassium channel protein, putative.
  
 
 0.552
ACE03077.1
PFAM: Ion transport 2 domain protein; KEGG: cte:CT0121 potassium channel protein, putative.
  
 
 0.552
ACE03257.1
PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: plt:Plut_1991 potassium channel protein.
  
 
 0.552
ACE03769.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.467
ACE03072.1
Hypothetical protein.
       0.424
ACE03069.1
TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: gvi:glr1343 glutathione-regulated potassium efflux system protein KefC homolog; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.423
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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