STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03088.1KEGG: vco:VC0395_0417 hypothetical protein. (61 aa)    
Predicted Functional Partners:
ACE04556.1
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: plt:Plut_0708 secretion protein HlyD.
  
     0.664
ACE03087.1
PFAM: Ferritin Dps family protein; KEGG: pvi:Cvib_1194 ferritin, Dps family protein.
       0.584
ACE03685.1
KEGG: fjo:Fjoh_4910 hypothetical protein.
 
     0.549
ACE04554.1
PFAM: outer membrane efflux protein; KEGG: pvi:Cvib_1116 outer membrane efflux protein.
 
     0.544
ACE05243.1
KEGG: cte:CT0061 hypothetical protein.
 
   
 0.496
ACE03948.1
KEGG: cte:CT1519 hypothetical protein.
  
     0.483
ACE04151.1
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: chu:CHU_3753 hypothetical protein.
  
     0.465
ACE03086.1
Domain of unknown function DUF1731; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; domain of unknown function DUF1731; KEGG: cte:CT0131 hypothetical protein.
  
    0.451
ACE04023.1
KEGG: cyt:cce_0300 hypothetical protein.
  
     0.432
ACE04146.1
Hypothetical protein; KEGG: bfs:BF0908 putative outer membrane protein.
  
     0.420
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.