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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03114.1PFAM: IstB domain protein ATP-binding protein; KEGG: gur:Gura_0558 IstB domain protein ATP-binding protein. (245 aa)    
Predicted Functional Partners:
ACE03113.1
PFAM: Integrase catalytic region; KEGG: gur:Gura_0559 integrase, catalytic region.
 
  
 0.949
ACE03040.1
PFAM: Integrase catalytic region; KEGG: plt:Plut_1830 transposase subunit.
 
  
 0.787
ACE03124.1
PFAM: Integrase catalytic region; KEGG: plt:Plut_1830 transposase subunit.
 
  
 0.787
ACE04292.1
PFAM: Integrase catalytic region; KEGG: gur:Gura_0559 integrase, catalytic region.
 
  
 0.787
ACE03331.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.544
ACE03115.1
KEGG: cch:Cag_1130 hypothetical protein.
       0.512
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.434
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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