STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03149.1PFAM: glycoside hydrolase family 3 domain protein; KEGG: cte:CT2124 beta-N-acetylglucosaminidase. (583 aa)    
Predicted Functional Partners:
ACE04791.1
PFAM: beta-lactamase; KEGG: cte:CT0324 D-alanyl-D-alanine carboxypeptidease, putative.
  
 0.971
ACE05335.1
Beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: cte:CT0090 glycosyl hydrolase, family 3.
  
  
 
0.925
ACE03233.1
PFAM: aminoglycoside phosphotransferase; KEGG: cte:CT2055 hypothetical protein.
    
 0.906
ACE04052.1
PFAM: conserved hypothetical protein; KEGG: cte:CT0970 hypothetical protein.
 
    0.793
ACE03231.1
PFAM: conserved hypothetical protein; KEGG: cte:CT2057 hypothetical protein.
 
    0.785
ACE03150.1
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pvi:Cvib_0193 HNH endonuclease.
       0.542
ACE03148.1
TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: plt:Plut_0124 chlorophyllide reductase subunit Z.
       0.538
ACE03018.1
PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: cte:CT2236 muramoyltetrapeptide carboxypeptidase, putative.
  
   
 0.464
ACE04678.1
Histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
 
   
 0.410
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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