STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03167.1Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: gur:Gura_0045 ferric uptake regulator, Fur family; Belongs to the Fur family. (152 aa)    
Predicted Functional Partners:
ACE03169.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT2105 ABC transporter, ATP-binding protein.
  
  
 0.863
ACE03168.1
PFAM: periplasmic solute binding protein; KEGG: cte:CT2106 adhesion protein, putative; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.851
ACE03170.1
PFAM: ABC-3 protein; KEGG: plt:Plut_0141 ABC 3 transport family protein.
 
  
 0.793
ACE03799.1
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: plt:Plut_1493 thiolredoxin peroxidase.
  
  
 0.543
ACE04487.1
KEGG: plt:Plut_1000 hypothetical protein.
  
    0.506
ACE03128.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: tte:TTE1767 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
     0.480
ACE03947.1
PFAM: CoA-binding domain protein; KEGG: cte:CT1344 hypothetical protein.
  
    0.472
ACE04272.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: pvi:Cvib_1621 rubredoxin-type Fe(Cys)4 protein.
  
  
 0.469
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.443
ACE03171.1
KEGG: plt:Plut_1311 hypothetical protein.
       0.437
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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