STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03171.1KEGG: plt:Plut_1311 hypothetical protein. (445 aa)    
Predicted Functional Partners:
ACE03170.1
PFAM: ABC-3 protein; KEGG: plt:Plut_0141 ABC 3 transport family protein.
     
 0.531
ACE03172.1
KEGG: plt:Plut_2041 hypothetical protein.
       0.481
ACE03168.1
PFAM: periplasmic solute binding protein; KEGG: cte:CT2106 adhesion protein, putative; Belongs to the bacterial solute-binding protein 9 family.
     
 0.460
ACE03167.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: gur:Gura_0045 ferric uptake regulator, Fur family; Belongs to the Fur family.
  
    0.447
ACE03169.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT2105 ABC transporter, ATP-binding protein.
       0.437
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
  
    0.406
ACE04543.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.401
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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