STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03184.1PFAM: integrase family protein; KEGG: spc:Sputcn32_4000 phage integrase family protein; Belongs to the 'phage' integrase family. (384 aa)    
Predicted Functional Partners:
ACE03188.1
KEGG: pdi:BDI_2985 putative excisionase.
 
     0.836
ACE03185.1
Hypothetical protein.
       0.773
ACE03186.1
KEGG: son:SO_4046 hypothetical protein.
       0.773
ACE03190.1
TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: fps:FP0387 hypothetical protein.
 
   
 0.655
xerC
Integrase family protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
 
 
 
 0.612
ACE03187.1
Hypothetical protein.
       0.603
ACE03649.1
KEGG: pgi:PG0872 mobilizable transposon, xis protein.
 
     0.541
ACE03638.1
TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: chu:CHU_1463 excisionase.
 
     0.534
ACE03634.1
PFAM: integrase family protein; KEGG: bfs:BF1685 putative bacteriophage integrase; Belongs to the 'phage' integrase family.
 
 
 
0.432
ACE03183.1
KEGG: rba:RB6865 hypothetical protein.
       0.410
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.