STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03206.1PFAM: metallophosphoesterase; KEGG: cte:CT2092 hypothetical protein. (267 aa)    
Predicted Functional Partners:
ACE03205.1
PFAM: Peptidase M23; KEGG: plt:Plut_2033 membrane proteins related to metalloendopeptidase-like.
       0.775
ACE03204.1
Hypothetical protein.
       0.697
ACE03706.1
KEGG: gvi:gll3694 hypothetical protein.
  
     0.604
ACE04115.1
Carotene 7,8-desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cch:Cag_1188 phytoene desaturase.
  
     0.581
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.558
ACE04208.1
KEGG: plt:Plut_0955 hypothetical protein.
  
     0.555
ACE03011.1
KEGG: cte:CT2257 hypothetical protein.
  
     0.551
ACE04633.1
PFAM: phosphatidate cytidylyltransferase; protein of unknown function DUF92 transmembrane; KEGG: plt:Plut_0610 membrane protein.
  
     0.551
ACE03894.1
Carotene 7,8-desaturase; PFAM: amine oxidase; KEGG: cte:CT1414 zeta-carotene desaturase.
  
     0.547
ACE04308.1
NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: pvi:Cvib_0527 NmrA family protein.
  
     0.541
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.