STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03233.1PFAM: aminoglycoside phosphotransferase; KEGG: cte:CT2055 hypothetical protein. (334 aa)    
Predicted Functional Partners:
ACE03232.1
PFAM: Nucleotidyl transferase; KEGG: cte:CT2056 mannose-1-phosphate guanylyltransferase, putative.
  
 0.966
ACE03376.1
PFAM: Nucleotidyl transferase; KEGG: pvi:Cvib_1552 UDP-N-acetylglucosamine pyrophosphorylase.
    
 0.913
ACE03149.1
PFAM: glycoside hydrolase family 3 domain protein; KEGG: cte:CT2124 beta-N-acetylglucosaminidase.
    
 0.906
ACE05335.1
Beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: cte:CT0090 glycosyl hydrolase, family 3.
    
 0.906
ACE03809.1
PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: plt:Plut_1484 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase.
  
  
 0.607
ACE03231.1
PFAM: conserved hypothetical protein; KEGG: cte:CT2057 hypothetical protein.
 
     0.573
ACE03234.1
KEGG: pvi:Cvib_0367 chlorosome envelope protein B.
       0.513
ACE04631.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: plt:Plut_0612 ExbD/TolR family protein.
 
     0.506
ACE03230.1
PFAM: Na+/solute symporter; KEGG: plt:Plut_2009 sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.468
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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