STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03243.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pvi:Cvib_0372 short-chain dehydrogenase/reductase SDR. (258 aa)    
Predicted Functional Partners:
ACE04322.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cte:CT0920 7-alpha-hydroxysteroid dehydrogenase.
 
 
 0.779
ACE03424.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cte:CT1766 3-oxoacyl-(acyl-carrier-protein) reductase, putative.
 
 
 0.761
ACE03216.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cte:CT2085 oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.759
ACE03244.1
PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: mac:MA2698 hypothetical protein.
       0.512
ACE03242.1
KEGG: cte:CT2051 hypothetical protein.
       0.465
ACE04308.1
NmrA family protein; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: pvi:Cvib_0527 NmrA family protein.
 
 
   0.444
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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