STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03247.1PFAM: outer membrane efflux protein; KEGG: cch:Cag_0122 LipD protein, putative. (441 aa)    
Predicted Functional Partners:
ACE03248.1
KEGG: pvi:Cvib_1643 hypothetical protein.
 
 
 0.945
ACE04006.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: fjo:Fjoh_4299 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.940
ACE03249.1
PFAM: acriflavin resistance protein; KEGG: cch:Cag_0123 AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.936
ACE04008.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: pvi:Cvib_0734 RND efflux system, outer membrane lipoprotein, NodT family.
  
  
  0.912
ACE03246.1
PFAM: protein of unknown function DUF156; KEGG: cte:CT2050 hypothetical protein.
       0.645
ACE03245.1
PFAM: alpha/beta hydrolase fold; KEGG: pvi:Cvib_1587 alpha/beta hydrolase fold.
       0.634
ACE03944.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cch:Cag_0987 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.632
ACE03937.1
PFAM: cytochrome c class I; KEGG: pvi:Cvib_1623 cytochrome c, class I.
  
    0.607
ACE04065.1
KEGG: cte:CT0982 hypothetical protein.
 
     0.597
ACE03272.1
Hypothetical protein; KEGG: pvi:Cvib_1623 cytochrome c, class I.
  
    0.594
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.