STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03274.1KEGG: plt:Plut_1976 photosystem P840 reaction center, large subunit. (733 aa)    
Predicted Functional Partners:
ACE03275.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: plt:Plut_1975 photosystem P840 reaction center iron-sulfur protein.
   
   0.755
ACE03792.1
PFAM: bacteriochlorophyll A protein; KEGG: plt:Plut_1500 bacteriochlorophyll A protein.
    
   0.627
ACE03537.1
KEGG: cte:CT1639 photosystem P840 reaction center cytochrome c-551.
    
   0.507
ACE04626.1
Hypothetical protein; KEGG: cch:Cag_1894 photosystem P840 reaction center protein PscD.
    
   0.507
ACE04303.1
PFAM: ferredoxin; KEGG: cte:CT1382 chlorosome envelope protein I.
    
   0.497
ACE04616.1
PFAM: ferredoxin; KEGG: cte:CT0651 chlorosome envelope protein J.
    
   0.497
ACE04504.1
PFAM: cytochrome c class I; KEGG: cch:Cag_1358 probable cb-type cytochrome c oxidase subunit III.
    
   0.465
ACE04506.1
PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: cch:Cag_1357 cytochrome-c oxidase FixO chain.
    
   0.465
ACE04487.1
KEGG: plt:Plut_1000 hypothetical protein.
    
   0.416
ACE05275.1
KEGG: cch:Cag_1677 Ric1 protein.
    
   0.416
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.