STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03305.1KEGG: gsu:GSU1361 Piwi domain protein. (474 aa)    
Predicted Functional Partners:
ACE03304.1
KEGG: gsu:GSU1360 hypothetical protein.
     0.946
ACE03302.1
PFAM: N-6 DNA methylase; KEGG: ava:Ava_1159 N-6 DNA methylase.
       0.774
ACE03303.1
PFAM: restriction modification system DNA specificity domain; KEGG: pab:PAB2150 type I restriction-modification enzyme, S subunit.
       0.774
ACE03306.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.740
ACE03307.1
PFAM: protein of unknown function DUF45; KEGG: ava:Ava_1155 metal-dependent hydrolase-like.
       0.737
ACE03644.1
PFAM: TRAG family protein; KEGG: mlo:mlr6395 conjugal transfer protein TraG.
  
     0.622
ACE03643.1
KEGG: mlo:mlr6191 hypothetical protein.
  
     0.589
ACE03645.1
KEGG: bbt:BBta_7439 hypothetical protein.
  
     0.588
ACE03642.1
KEGG: nar:Saro_0362 conjugal transfer protein precursor.
  
     0.554
ACE04408.1
PFAM: nuclear protein SET; KEGG: cte:CT0952 hypothetical protein.
    
 0.521
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.