Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE03308.1Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: ccr:CC_2771 transcriptional regulator, Cro/CI family. (115 aa)    
Predicted Functional Partners:
ACE05071.1
PFAM: HipA domain protein; KEGG: pvi:Cvib_0660 HipA domain protein.
 
 
 0.849
ACE05072.1
TIGRFAM: HipA N-terminal domain protein; KEGG: pvi:Cvib_0661 hypothetical protein.
 
 
 0.844
ACE03518.1
KEGG: ppd:Ppro_1113 conserved hypothetical cytosolic protein.
    
 0.705
ACE03687.1
PFAM: PemK family protein; KEGG: plt:Plut_1919 transcriptional modulator of MazE/toxin, MazF.
    
 0.568
ACE04244.1
Transcriptional regulator/antitoxin, MazE; TIGRFAM: addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: vei:Veis_2467 SpoVT/AbrB domain protein.
     
 0.546
ACE05157.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
  
 0.527
ACE04091.1
TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: dol:Dole_1697 transcriptional regulator, AbrB family.
     
  0.517
ACE04330.1
TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: gur:Gura_1405 transcriptional regulator, AbrB family.
     
  0.517
ACE04849.1
PFAM: YcfA family protein; KEGG: gme:Gmet_1322 YcfA-like.
     
 0.463
ACE04858.1
KEGG: dsy:DSY3469 hypothetical protein.
     
 0.463
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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