STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03314.1PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cte:CT0180 lycopene cyclase, putative. (494 aa)    
Predicted Functional Partners:
ACE03913.1
PFAM: Squalene/phytoene synthase; KEGG: cte:CT1386 phytoene desaturase.
 
  
 0.905
bchN
Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
    0.611
bchB
Light-independent protochlorophyllide reductase, B subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
  
    0.590
ACE03988.1
Magnesium chelatase ATPase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
  
 0.583
ACE04115.1
Carotene 7,8-desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cch:Cag_1188 phytoene desaturase.
 
   
 0.563
ACE05132.1
PFAM: UbiA prenyltransferase; KEGG: cte:CT1992 bacteriochlorophyll a synthase.
 
  
 0.554
ACE03426.1
KEGG: pvi:Cvib_1484 hypothetical protein.
 
  
 0.552
ACE03241.1
KEGG: plt:Plut_1700 hypothetical protein.
 
  
 0.549
ACE04027.1
TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: cch:Cag_1105 bacteriochlorophyll/chlorophyll a synthase.
 
  
 0.522
ACE03313.1
PFAM: transcription activator effector binding; KEGG: cte:CT0179 hypothetical protein.
 
     0.521
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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