Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
ACE03317.1Hypothetical protein; KEGG: cte:CT0188 C-type cytochrome, putative. (130 aa)    
Predicted Functional Partners:
ACE04897.1
PFAM: Cytochrome b/b6 domain; KEGG: cch:Cag_0395 cytochrome b-c complex, cytochrome b subunit.
    
 0.791
ACE03318.1
PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: pvi:Cvib_1582 NAD-dependent epimerase/dehydratase.
  
    0.777
ACE04506.1
PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: cch:Cag_1357 cytochrome-c oxidase FixO chain.
  
 0.774
ACE03316.1
KEGG: cte:CT0182 hypothetical protein.
       0.709
ACE04504.1
PFAM: cytochrome c class I; KEGG: cch:Cag_1358 probable cb-type cytochrome c oxidase subunit III.
   
 0.669
ACE03319.1
KEGG: cte:CT0471 hypothetical protein.
       0.529
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
       0.529
ACE02998.1
PFAM: cytochrome c class I; KEGG: pvi:Cvib_0008 sulfide dehydrogenase (flavocytochrome), cytochrome c subunit.
  
 
 0.416
ACE03272.1
Hypothetical protein; KEGG: pvi:Cvib_1623 cytochrome c, class I.
  
 
 0.416
ACE03937.1
PFAM: cytochrome c class I; KEGG: pvi:Cvib_1623 cytochrome c, class I.
  
 
 0.416
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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