Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACE03340.1ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1383 ATPase. (594 aa)    
Predicted Functional Partners:
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.737
ACE03341.1
KEGG: ter:Tery_1487 hypothetical protein.
  
    0.666
ACE05075.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT1901 ABC transporter, ATP-binding protein.
 
  
0.596
gyrB
DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
  
 
 0.579
ACE03170.1
PFAM: ABC-3 protein; KEGG: plt:Plut_0141 ABC 3 transport family protein.
     
 0.563
ACE03342.1
PFAM: glycosyl transferase group 1; KEGG: gvi:gll2465 probable glycosyltransferase.
  
 
 0.547
ACE04068.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpe:RPE_4291 ABC transporter related.
     
  0.535
rpsB
PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
    
  0.506
ACE03619.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cte:CT0375 ABC transporter, ATP-binding protein.
 
 0.501
ACE03657.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cyt:cce_3417 ATP-binding protein of ABC transporter.
  
  
  0.498
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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