Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACE03343.1KEGG: pdi:BDI_2217 hypothetical protein. (119 aa)    
Predicted Functional Partners:
ACE03342.1
PFAM: glycosyl transferase group 1; KEGG: gvi:gll2465 probable glycosyltransferase.
  
  
 0.612
ACE03341.1
KEGG: ter:Tery_1487 hypothetical protein.
  
  
 0.502
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.438
ACE03269.1
TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: cte:CT2029 competence/damage-inducible protein CinA; Belongs to the CinA family.
     
 0.432
ACE03340.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1383 ATPase.
       0.431
ACE05127.1
PFAM: glycosyl transferase family 2; KEGG: cte:CT1987 glycosyl transferase.
 
  
 0.417
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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