STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03357.1PFAM: O-antigen polymerase; KEGG: plt:Plut_1804 hypothetical protein. (398 aa)    
Predicted Functional Partners:
ACE03356.1
PFAM: glycosyl transferase family 9; KEGG: plt:Plut_1800 LPS heptosyltransferase-like.
 
 
 0.985
ACE03324.1
TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: plt:Plut_1796 lipopolysaccharide heptosyltransferase II.
 
 
 0.927
ACE03761.1
Three-deoxy-D-manno-octulosonic-acid transferase domain protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
 0.908
ACE03355.1
PFAM: glycosyl transferase family 2; KEGG: plt:Plut_1799 hypothetical protein.
 
  
 0.843
ACE03338.1
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: pol:Bpro_3983 polysaccharide biosynthesis protein CapD.
 
  
 0.614
ACE04817.1
KEGG: plt:Plut_0421 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.598
ACE04888.1
Capsular exopolysaccharide family; KEGG: pvi:Cvib_1075 lipopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
  
  
 0.509
ACE03416.1
PFAM: TOBE domain protein; KEGG: sun:SUN_2104 hypothetical protein.
  
     0.483
ACE03350.1
PFAM: sugar transferase; KEGG: gur:Gura_1698 undecaprenyl-phosphate galactose phosphotransferase.
  
  
 0.481
ACE03354.1
PFAM: glycosyl transferase family 2; KEGG: plt:Plut_1798 hypothetical protein.
 
  
 0.467
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.