STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03379.1PFAM: outer membrane chaperone Skp (OmpH); KEGG: pvi:Cvib_1549 outer membrane chaperone Skp (OmpH). (196 aa)    
Predicted Functional Partners:
ACE03397.1
KEGG: plt:Plut_1752 hypothetical protein.
  
 
 0.946
ACE03398.1
TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: cte:CT0266 bacterial surface antigen family protein.
 
  
 0.863
ACE03378.1
PFAM: protein of unknown function DUF1239; KEGG: pvi:Cvib_1550 protein of unknown function DUF1239.
 
     0.821
ACE05148.1
KEGG: plt:Plut_0223 hypothetical protein.
  
     0.737
lpxC
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
 
    0.699
ACE03728.1
KEGG: cte:CT0523 hypothetical protein.
  
   
 0.687
ACE03501.1
KEGG: plt:Plut_1647 hypothetical protein.
  
     0.665
ACE05152.1
KEGG: cte:CT2013 hypothetical protein.
  
     0.663
ACE03500.1
PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: plt:Plut_1648 hypothetical protein.
 
  
 0.647
ACE03003.1
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: pvi:Cvib_0012 PpiC-type peptidyl-prolyl cis-trans isomerase.
  
  
 0.626
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.