Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACE03395.1PFAM: UvrB/UvrC protein; protein of unknown function DUF151; KEGG: plt:Plut_1753 hypothetical protein. (198 aa)    
Predicted Functional Partners:
ACE03322.1
PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: cte:CT0191 ATP-dependent Clp protease, ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family.
 
  
 0.674
ACE05218.1
PFAM: AAA ATPase central domain protein; Clp domain protein; SMART: AAA ATPase; KEGG: plt:Plut_0161 ATPase; Belongs to the ClpA/ClpB family.
  
  
 0.614
ACE05334.1
ATPase AAA-2 domain protein; PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: plt:Plut_2054 ATPase.
  
  
 0.614
ACE03393.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: pvi:Cvib_1536 electron transfer flavoprotein beta-subunit.
       0.547
ACE03394.1
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: pvi:Cvib_1535 electron transfer flavoprotein, alpha subunit.
       0.547
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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