STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03413.1KEGG: cch:Cag_0476 hypothetical protein. (87 aa)    
Predicted Functional Partners:
ACE03412.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
       0.595
ACE03415.1
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: abu:Abu_0012 molybdenum ABC transporter, periplasmic molybdate-binding protein.
       0.506
ACE03416.1
PFAM: TOBE domain protein; KEGG: sun:SUN_2104 hypothetical protein.
       0.506
ACE03417.1
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.506
ACE03418.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccv:CCV52592_0582 sulfate/thiosulfate import ATP-binding protein CysA (sulfate-transporting ATPase).
       0.506
ACE03411.1
PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: cte:CT0279 phosphoglucomutase/phosphomannomutase family protein.
       0.423
ACE03409.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gsu:GSU2792 hypothetical protein.
       0.404
ACE03410.1
PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: bsu:BSU31500 hypothetical protein.
       0.404
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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