STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03426.1KEGG: pvi:Cvib_1484 hypothetical protein. (510 aa)    
Predicted Functional Partners:
ACE03894.1
Carotene 7,8-desaturase; PFAM: amine oxidase; KEGG: cte:CT1414 zeta-carotene desaturase.
 
  
 0.976
ACE04619.1
Amine oxidase; PFAM: Rab GTPase activator; amine oxidase; FAD dependent oxidoreductase; KEGG: cte:CT0649 carotenoid isomerase, putative.
 
 
 0.976
ACE04792.1
PFAM: amine oxidase; Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: plt:Plut_0435 gamma-carotene desaturase.
 
 
 0.965
ACE04899.1
PFAM: hydroxyneurosporene synthase; KEGG: pvi:Cvib_1502 hydroxyneurosporene synthase.
  
 
 0.937
ACE03241.1
KEGG: plt:Plut_1700 hypothetical protein.
  
  
 
0.902
ACE04115.1
Carotene 7,8-desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cch:Cag_1188 phytoene desaturase.
 
   
 0.777
ACE04208.1
KEGG: plt:Plut_0955 hypothetical protein.
  
    0.772
lolD
ABC transporter-related protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
       0.763
ACE03011.1
KEGG: cte:CT2257 hypothetical protein.
  
     0.756
ACE05130.1
PFAM: phosphatidate cytidylyltransferase; KEGG: cte:CT1990 hypothetical protein.
  
     0.752
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.