STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03457.1KEGG: amr:AM1_6172 transposase, IS5 family, putative. (498 aa)    
Predicted Functional Partners:
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
       0.774
ACE03660.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.567
ACE03123.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.553
ACE03721.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.553
ACE04093.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.553
ACE04447.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.553
ACE04840.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.553
ACE03339.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.535
ACE05092.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.535
ACE05311.1
KEGG: plt:Plut_1857 hypothetical protein.
  
     0.535
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.