rsmI protein (Chlorobium phaeobacteroides BS1)

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rsmI

Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (249 aa)

Predicted Functional Partners:

panC

0.681

rpsN

0.589

rpsF

0.566

rpsO

0.551

ACE03832.1

0.540

rpsU

0.540

rpsD

0.532

rpsQ

0.529

tadA

0.528

rpsB

0.516

Your Current Organism:

Chlorobium phaeobacteroides BS1

NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACE03832.1	rsmI	Cphamn1_0884	Cphamn1_0554	KEGG: rrs:RoseRS_2538 hypothetical protein.	Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.540
panC	rsmI	Cphamn1_0553	Cphamn1_0554	Pantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.	Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.681
rpsB	rpsD	Cphamn1_2013	Cphamn1_2270	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.997
rpsB	rpsF	Cphamn1_2013	Cphamn1_0162	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.995
rpsB	rpsN	Cphamn1_2013	Cphamn1_2283	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.995
rpsB	rpsO	Cphamn1_2013	Cphamn1_0406	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.988
rpsB	rpsQ	Cphamn1_2013	Cphamn1_2287	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.996
rpsB	rpsU	Cphamn1_2013	Cphamn1_2176	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	PFAM: ribosomal protein S21; KEGG: plt:Plut_0283 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.978
rpsB	rsmI	Cphamn1_2013	Cphamn1_0554	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.516
rpsD	rpsB	Cphamn1_2270	Cphamn1_2013	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.997
rpsD	rpsF	Cphamn1_2270	Cphamn1_0162	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.993
rpsD	rpsN	Cphamn1_2270	Cphamn1_2283	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.996
rpsD	rpsO	Cphamn1_2270	Cphamn1_0406	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.995
rpsD	rpsQ	Cphamn1_2270	Cphamn1_2287	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.996
rpsD	rpsU	Cphamn1_2270	Cphamn1_2176	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	PFAM: ribosomal protein S21; KEGG: plt:Plut_0283 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.960
rpsD	rsmI	Cphamn1_2270	Cphamn1_0554	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.532
rpsF	rpsB	Cphamn1_0162	Cphamn1_2013	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	PFAM: ribosomal protein S2; KEGG: cte:CT1781 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.995
rpsF	rpsD	Cphamn1_0162	Cphamn1_2270	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.993
rpsF	rpsN	Cphamn1_0162	Cphamn1_2283	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.994
rpsF	rpsO	Cphamn1_0162	Cphamn1_0406	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.984

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