Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ACE03527.1KEGG: pca:Pcar_1772 protein-tyrosine-phosphatase. (61 aa)    
Predicted Functional Partners:
ACE03528.1
PFAM: regulatory protein ArsR; KEGG: rru:Rru_A1450 transcriptional regulator, ArsR family.
 
  
 0.736
ACE03526.1
TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: dol:Dole_2882 arsenical-resistance protein.
  
  
 0.710
ACE04888.1
Capsular exopolysaccharide family; KEGG: pvi:Cvib_1075 lipopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
  
 
 0.501
ACE03525.1
Hypothetical protein.
       0.482
ACE03529.1
Hypothetical protein.
       0.439
ACE04139.1
TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: pvi:Cvib_1012 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.408
ACE04393.1
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: plt:Plut_1229 thioredoxin.
  
 
 0.408
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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