STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03554.1KEGG: sru:SRU_1396 hypothetical protein. (336 aa)    
Predicted Functional Partners:
ACE04938.1
KEGG: sru:SRU_1533 hypothetical protein.
  
     0.774
ACE03442.1
KEGG: cte:CT0480 hypothetical protein.
  
     0.749
ACE03924.1
KEGG: plt:Plut_1345 hypothetical protein.
  
     0.671
ACE04719.1
PFAM: chaperonin Cpn10; KEGG: cch:Cag_1167 chaperonin, 10 kDa.
  
     0.653
ACE03553.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.648
ACE04695.1
SMART: Tetratricopeptide domain protein; KEGG: cte:CT1812 hypothetical protein.
  
     0.622
ACE05152.1
KEGG: cte:CT2013 hypothetical protein.
  
     0.614
ACE03728.1
KEGG: cte:CT0523 hypothetical protein.
  
     0.605
ACE03329.1
PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: pvi:Cvib_1572 PpiC-type peptidyl-prolyl cis-trans isomerase.
  
     0.558
tatA
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
       0.532
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.