STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03570.1KEGG: plt:Plut_1597 hypothetical protein. (375 aa)    
Predicted Functional Partners:
ACE04712.1
PFAM: conserved hypothetical protein; KEGG: cte:CT0361 hypothetical protein.
  
     0.615
ACE04482.1
KEGG: hch:HCH_04190 hypothetical protein.
 
   
 0.553
ACE04964.1
KEGG: cte:CT1571 hypothetical protein.
  
     0.543
ACE03760.1
KEGG: pvi:Cvib_1196 hypothetical protein.
  
     0.534
ispF
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
       0.533
ACE04962.1
KEGG: cte:CT1571 hypothetical protein.
  
     0.530
ACE04147.1
PFAM: metallophosphoesterase; KEGG: plt:Plut_1253 hypothetical protein.
  
     0.446
ACE04965.1
KEGG: cte:CT1571 hypothetical protein.
  
     0.446
ACE04462.1
PFAM: phytase; KEGG: fjo:Fjoh_1367 phytase.
  
     0.440
ACE04261.1
KEGG: ana:all0050 unknown protein.
  
     0.437
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.