Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACE03608.1Hypothetical protein; KEGG: scl:sce2897 conserved putative secreted protein. (201 aa)    
Predicted Functional Partners:
ACE03609.1
PFAM: pentapeptide repeat protein; KEGG: amr:AM1_1834 pentapeptide repeat protein.
  
    0.776
ACE03607.1
KEGG: plt:Plut_1857 hypothetical protein.
       0.514
ACE04897.1
PFAM: Cytochrome b/b6 domain; KEGG: cch:Cag_0395 cytochrome b-c complex, cytochrome b subunit.
 
 
 
 0.462
ACE03611.1
PFAM: cytochrome c assembly protein; KEGG: cte:CT1559 cytochrome c biogenesis protein.
  
    0.438
ACE03610.1
KEGG: cte:CT1560 hypothetical protein.
  
    0.436
ACE04898.1
Plastoquinol--plastocyanin reductase; PFAM: Rieske [2Fe-2S] domain protein; Cytochrome b6-f complex Fe-S subunit; KEGG: plt:Plut_1719 plastoquinol--plastocyanin reductase.
 
 
 0.426
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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