STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03613.1PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sru:SRU_2108 TonB dependent receptor, putative. (768 aa)    
Predicted Functional Partners:
ACE03594.1
TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: plt:Plut_1585 TonB-like.
  
 
 0.740
ACE04630.1
KEGG: cte:CT0635 hypothetical protein.
  
 
 0.740
ACE03477.1
KEGG: ter:Tery_2034 RTX toxins and related Ca2+-binding protein.
    
 
 0.665
ACE03248.1
KEGG: pvi:Cvib_1643 hypothetical protein.
  
   
 0.606
ACE03249.1
PFAM: acriflavin resistance protein; KEGG: cch:Cag_0123 AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   
 0.573
ACE03247.1
PFAM: outer membrane efflux protein; KEGG: cch:Cag_0122 LipD protein, putative.
  
  
 0.528
ACE04438.1
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plt:Plut_1135 ATPase.
  
  
 0.508
ACE04449.1
PFAM: periplasmic binding protein; KEGG: pvi:Cvib_0804 periplasmic binding protein.
  
  
 0.508
ACE03612.1
Hypothetical protein.
       0.506
ACE04065.1
KEGG: cte:CT0982 hypothetical protein.
  
     0.459
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.