STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACE03617.1PFAM: phosphoribulokinase/uridine kinase; KEGG: plt:Plut_0330 uridine kinase-like. (237 aa)    
Predicted Functional Partners:
ACE04492.1
PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rma:Rmag_0627 D-3-phosphoglycerate dehydrogenase.
   
  0.885
ACE03618.1
PFAM: nitroreductase; KEGG: cch:Cag_0586 hypothetical protein.
 
     0.810
ACE03300.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pvi:Cvib_1592 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
 
   0.766
ACE03109.1
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: pvi:Cvib_1006 PHP C-terminal domain protein.
  
     0.702
ACE04392.1
KEGG: pvi:Cvib_0981 hypothetical protein.
 
     0.702
ACE03808.1
KEGG: pvi:Cvib_1310 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 
 0.691
ACE04261.1
KEGG: ana:all0050 unknown protein.
  
     0.682
ACE03627.1
KEGG: cte:CT0397 hypothetical protein.
  
     0.661
ACE03465.1
PFAM: Methyltransferase type 12; KEGG: pvi:Cvib_1458 methyltransferase type 11.
  
    0.640
ACE03936.1
KEGG: lch:Lcho_1136 hypothetical protein.
  
 0.609
Your Current Organism:
Chlorobium phaeobacteroides BS1
NCBI taxonomy Id: 331678
Other names: C. phaeobacteroides BS1, Chlorobium phaeobacteroides MN1, Chlorobium phaeobacteroides str. BS1, Chlorobium phaeobacteroides strain BS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.